Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm44437-201ENSMUST00000203832 4038 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm8049-201ENSMUST00000214336 1782 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm24272-201ENSMUST00000102329 98 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm15422-201ENSMUST00000117453 541 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm12740-201ENSMUST00000118794 308 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm15618-201ENSMUST00000121610 452 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Mir7235-201ENSMUST00000183796 56 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm27998-201ENSMUST00000184902 361 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm38237-201ENSMUST00000193366 376 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm9504-201ENSMUST00000196322 468 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm18430-201ENSMUST00000197534 682 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm5711-201ENSMUST00000197896 421 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm2602-201ENSMUST00000202112 571 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm44075-201ENSMUST00000204208 216 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.44□□□□□ -1.22
Cxcl12P40224 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Cxcl12P40224 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Cxcl12P40224 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Cblb-205ENSMUST00000227756 3378 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm14865-201ENSMUST00000117523 494 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm12844-201ENSMUST00000119463 582 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm11553-201ENSMUST00000120682 240 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm14070-201ENSMUST00000120773 428 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm23776-201ENSMUST00000158993 325 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.43□□□□□ -1.22
Cxcl12P40224 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm4083-201ENSMUST00000207158 451 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Cxcl12P40224 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm37648-201ENSMUST00000192072 2563 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm12183-201ENSMUST00000120566 1848 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms