Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Traf1P39428 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Traf1P39428 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Traf1P39428 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Traf1P39428 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.39□□□□□ -1.07
Traf1P39428 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Traf1P39428 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Traf1P39428 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Traf1P39428 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.39□□□□□ -1.07
Traf1P39428 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.39□□□□□ -1.07
Traf1P39428 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm37142-201ENSMUST00000193718 3110 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.38□□□□□ -1.07
Traf1P39428 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Traf1P39428 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.38□□□□□ -1.07
Traf1P39428 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.38□□□□□ -1.07
Traf1P39428 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm6434-201ENSMUST00000163316 372 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Traf1P39428 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm36928-201ENSMUST00000192466 694 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Gm37325-201ENSMUST00000194971 694 ntBASIC8.38□□□□□ -1.07
Traf1P39428 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.38□□□□□ -1.07
Traf1P39428 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Traf1P39428 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Traf1P39428 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.38□□□□□ -1.07
Traf1P39428 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.38□□□□□ -1.07
Traf1P39428 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Traf1P39428 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Traf1P39428 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Gm25311-201ENSMUST00000104136 132 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Gm11622-201ENSMUST00000120525 691 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.37□□□□□ -1.07
Traf1P39428 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.37□□□□□ -1.07
Traf1P39428 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.37□□□□□ -1.07
Traf1P39428 Gm27185-201ENSMUST00000184296 247 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 Gm8182-201ENSMUST00000197863 769 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.37□□□□□ -1.07
Traf1P39428 Gm43906-201ENSMUST00000203194 906 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Gm5154-201ENSMUST00000203971 399 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.37□□□□□ -1.07
Traf1P39428 Gm8275-201ENSMUST00000219732 424 ntBASIC8.37□□□□□ -1.07
Traf1P39428 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.37□□□□□ -1.07
Traf1P39428 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Traf1P39428 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Traf1P39428 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 155 ms