Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm13237-201ENSMUST00000122151 635 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm13669-201ENSMUST00000122366 457 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Mir1953-201ENSMUST00000157866 89 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
Hoxc9P09633 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Mir7046-201ENSMUST00000183435 66 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm9504-201ENSMUST00000196322 468 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm44471-201ENSMUST00000197963 100 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm18789-201ENSMUST00000216115 550 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm19024-201ENSMUST00000194681 1319 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm14896-201ENSMUST00000121311 1351 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 AC153955.4-201ENSMUST00000217069 2752 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm25724-201ENSMUST00000104531 117 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm43141-201ENSMUST00000199695 274 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm5154-201ENSMUST00000203971 399 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm9367-201ENSMUST00000205703 546 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm45782-201ENSMUST00000212670 366 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm2774-201ENSMUST00000213650 1165 ntBASIC9.22□□□□□ -0.93
Hoxc9P09633 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC9.22□□□□□ -0.93
Hoxc9P09633 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Hoxc9P09633 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxc9P09633 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxc9P09633 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.21□□□□□ -0.93
Hoxc9P09633 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Gm15681-201ENSMUST00000137501 2704 ntBASIC9.21□□□□□ -0.93
Hoxc9P09633 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxc9P09633 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxc9P09633 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxc9P09633 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
Hoxc9P09633 Gm36401-201ENSMUST00000194255 2028 ntBASIC9.21□□□□□ -0.93
Hoxc9P09633 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxc9P09633 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxc9P09633 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Hoxc9P09633 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms