Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm29376-201ENSMUST00000189357 835 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm4032-201ENSMUST00000210886 487 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm7570-201ENSMUST00000215246 698 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm10913-201ENSMUST00000133732 463 ntBASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm18036-201ENSMUST00000195256 272 ntBASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Col6a3E9PWQ3 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm11105-201ENSMUST00000112781 478 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm2182-201ENSMUST00000145243 663 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm24685-201ENSMUST00000157764 285 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm25655-201ENSMUST00000158465 290 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm21772-201ENSMUST00000169213 478 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm17126-201ENSMUST00000172276 523 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Mir6343-201ENSMUST00000183584 84 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm37380-201ENSMUST00000193752 397 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm18839-201ENSMUST00000204292 670 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm24621-201ENSMUST00000082679 140 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm37829-201ENSMUST00000193864 2213 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm24125-201ENSMUST00000104105 137 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 CT571245.1-201ENSMUST00000218642 3465 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col6a3E9PWQ3 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Gm23965-201ENSMUST00000157969 142 ntBASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Mir3080-201ENSMUST00000175010 79 ntBASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Gm43219-201ENSMUST00000197972 1937 ntBASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col6a3E9PWQ3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms