Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Nsa2-203ENSMUST00000225410 974 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC154640.3-201ENSMUST00000227492 846 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm38105-201ENSMUST00000192112 2621 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm15125-201ENSMUST00000116185 800 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm13735-201ENSMUST00000120217 670 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm14122-201ENSMUST00000122076 973 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm15878-201ENSMUST00000127561 306 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm19200-201ENSMUST00000182579 1001 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Dlx6os1-204ENSMUST00000184182 146 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm7436-201ENSMUST00000187229 391 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm19231-201ENSMUST00000193212 830 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm44003-201ENSMUST00000203024 490 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm9652-201ENSMUST00000209345 163 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC111046.1-201ENSMUST00000217715 412 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm6887-201ENSMUST00000080945 482 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm44937-201ENSMUST00000207705 2691 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms