Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm26356-201ENSMUST00000158217 283 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm25643-201ENSMUST00000158874 103 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm5766-202ENSMUST00000161633 799 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm5174-201ENSMUST00000171131 1423 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm5335-201ENSMUST00000182995 1000 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm28885-201ENSMUST00000185615 563 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm3364-201ENSMUST00000196016 1217 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm42776-201ENSMUST00000198031 406 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm18640-201ENSMUST00000209777 2165 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 AC153506.2-201ENSMUST00000218051 257 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm5040-201ENSMUST00000218609 800 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 AC165260.2-202ENSMUST00000224998 631 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim35Q8C006 AC134420.1-201ENSMUST00000227027 289 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 AC107711.2-203ENSMUST00000227827 762 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm10092-201ENSMUST00000077110 180 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm22572-201ENSMUST00000082985 105 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm8618-201ENSMUST00000097570 432 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Cald1-204ENSMUST00000115026 4080 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm7353-201ENSMUST00000069044 2866 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 CT009713.3-201ENSMUST00000224987 1565 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 CT572991.1-201ENSMUST00000222755 1423 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Olfr1221-203ENSMUST00000213404 2778 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm14835-201ENSMUST00000119039 315 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm15480-201ENSMUST00000120442 519 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm11438-201ENSMUST00000121582 189 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm15885-201ENSMUST00000122114 388 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm22236-201ENSMUST00000157093 106 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm3687-201ENSMUST00000161710 460 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm7925-201ENSMUST00000166690 401 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm29062-201ENSMUST00000186032 694 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm28255-201ENSMUST00000187101 694 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm29487-201ENSMUST00000190146 256 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm38004-201ENSMUST00000192972 357 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm43610-201ENSMUST00000199117 365 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm44721-201ENSMUST00000206978 472 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim35Q8C006 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm18749-201ENSMUST00000222410 692 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 AC154461.1-201ENSMUST00000224207 1005 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim35Q8C006 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim35Q8C006 Gm22628-201ENSMUST00000082988 107 ntBASIC9.85□□□□□ -0.83
Trim35Q8C006 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms