Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm22439-201ENSMUST00000104048 132 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm25276-201ENSMUST00000104300 124 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm15054-201ENSMUST00000117393 281 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm15422-201ENSMUST00000117453 541 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm5759-201ENSMUST00000119203 811 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm12105-201ENSMUST00000120846 779 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm5392-201ENSMUST00000122189 789 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm24647-201ENSMUST00000157112 113 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm28142-201ENSMUST00000186899 698 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm44554-201ENSMUST00000208738 147 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm6885-201ENSMUST00000217261 372 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm19095-201ENSMUST00000220533 730 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.72□□□□□ -1.17
Syne3Q4FZC9 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne3Q4FZC9 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne3Q4FZC9 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm14480-201ENSMUST00000118521 433 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm24893-201ENSMUST00000122745 369 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Mir7029-201ENSMUST00000184777 61 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm27458-201ENSMUST00000185108 121 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm44471-201ENSMUST00000197963 100 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Gm2089-201ENSMUST00000218294 479 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne3Q4FZC9 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms