Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.82□□□□□ -1.16
NrlP54846 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NrlP54846 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.82□□□□□ -1.16
NrlP54846 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm12507-201ENSMUST00000119155 415 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm12174-201ENSMUST00000119853 813 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm11895-201ENSMUST00000122165 467 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.82□□□□□ -1.16
NrlP54846 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm24157-201ENSMUST00000175265 111 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.82□□□□□ -1.16
NrlP54846 Gm9423-201ENSMUST00000183173 997 ntBASIC7.82□□□□□ -1.16
NrlP54846 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Trdv3-201ENSMUST00000198551 309 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm43849-201ENSMUST00000201086 215 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm44192-201ENSMUST00000204195 556 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm4585-201ENSMUST00000207218 452 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm44849-201ENSMUST00000207595 484 ntBASIC7.82□□□□□ -1.16
NrlP54846 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.82□□□□□ -1.16
NrlP54846 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.82□□□□□ -1.16
NrlP54846 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.82□□□□□ -1.16
NrlP54846 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.82□□□□□ -1.16
NrlP54846 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.82□□□□□ -1.16
NrlP54846 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NrlP54846 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.82□□□□□ -1.16
NrlP54846 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.82□□□□□ -1.16
NrlP54846 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NrlP54846 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.81□□□□□ -1.16
NrlP54846 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NrlP54846 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.81□□□□□ -1.16
NrlP54846 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Gm26419-201ENSMUST00000104272 133 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm13423-201ENSMUST00000117205 888 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm13900-201ENSMUST00000119402 498 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm11850-201ENSMUST00000119679 479 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.81□□□□□ -1.16
NrlP54846 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm13221-201ENSMUST00000121712 430 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.81□□□□□ -1.16
NrlP54846 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.81□□□□□ -1.16
NrlP54846 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.81□□□□□ -1.16
NrlP54846 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.81□□□□□ -1.16
NrlP54846 Gm22226-201ENSMUST00000157355 109 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm22882-201ENSMUST00000157749 124 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.81□□□□□ -1.16
NrlP54846 Gm3307-201ENSMUST00000176164 632 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm27178-201ENSMUST00000184962 340 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm37526-201ENSMUST00000194640 619 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm4525-201ENSMUST00000198831 254 ntBASIC7.81□□□□□ -1.16
NrlP54846 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NrlP54846 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.81□□□□□ -1.16
NrlP54846 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.81□□□□□ -1.16
NrlP54846 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.81□□□□□ -1.16
NrlP54846 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC7.81□□□□□ -1.16
NrlP54846 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.81□□□□□ -1.16
NrlP54846 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.81□□□□□ -1.16
NrlP54846 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NrlP54846 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NrlP54846 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.81□□□□□ -1.16
NrlP54846 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.81□□□□□ -1.16
NrlP54846 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms