Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Hoxc8P09025 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Mir674-201ENSMUST00000102421 100 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm16073-201ENSMUST00000116032 517 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm14070-201ENSMUST00000120773 428 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm8722-201ENSMUST00000121466 769 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.69□□□□□ -1.18
Hoxc8P09025 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.69□□□□□ -1.18
Hoxc8P09025 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm5711-201ENSMUST00000197896 421 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm5154-201ENSMUST00000203971 399 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.69□□□□□ -1.18
Hoxc8P09025 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Mir106b-201ENSMUST00000083580 82 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Hoxc8P09025 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Hoxc8P09025 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hoxc8P09025 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.69□□□□□ -1.18
Hoxc8P09025 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm8312-201ENSMUST00000119380 618 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm15242-201ENSMUST00000122459 283 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm37191-201ENSMUST00000193346 388 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm37322-201ENSMUST00000193409 337 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm4042-201ENSMUST00000216946 637 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm46231-201ENSMUST00000220152 314 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm9800-201ENSMUST00000052615 336 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hoxc8P09025 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hoxc8P09025 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.68□□□□□ -1.18
Hoxc8P09025 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hoxc8P09025 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hoxc8P09025 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hoxc8P09025 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.67□□□□□ -1.18
Hoxc8P09025 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hoxc8P09025 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hoxc8P09025 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms