Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm38244-201ENSMUST00000191737 2586 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm18248-201ENSMUST00000191164 1846 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm8812-201ENSMUST00000118496 412 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm44538-201ENSMUST00000205615 348 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm8058-201ENSMUST00000217247 587 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm9535-201ENSMUST00000218499 768 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm18620-201ENSMUST00000222295 324 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 CT025579.4-201ENSMUST00000224598 627 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Mir135a-1-201ENSMUST00000083473 90 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm44194-201ENSMUST00000204222 3229 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm44763-201ENSMUST00000208287 2019 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 n-R5s72-201ENSMUST00000104518 119 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm14747-201ENSMUST00000149888 984 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm23756-201ENSMUST00000157582 114 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm18699-201ENSMUST00000190713 243 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm19087-201ENSMUST00000191430 946 ntBASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc180J3QNE4 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm4992-201ENSMUST00000120256 768 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm12140-201ENSMUST00000121214 544 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm14380-201ENSMUST00000122298 431 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm25574-201ENSMUST00000175245 249 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 AC131029.2-201ENSMUST00000226696 628 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm26967-201ENSMUST00000182878 2303 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 AC122769.3-201ENSMUST00000227739 3245 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 AC130831.1-201ENSMUST00000224546 1474 ntBASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc180J3QNE4 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm38173-201ENSMUST00000193126 2314 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm19024-201ENSMUST00000194681 1319 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms