Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6ap1Q9R1Q9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6ap1Q9R1Q9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.02■□□□□ 0.48
Atp6ap1Q9R1Q9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6ap1Q9R1Q9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6ap1Q9R1Q9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6ap1Q9R1Q9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6ap1Q9R1Q9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6ap1Q9R1Q9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6ap1Q9R1Q9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6ap1Q9R1Q9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6ap1Q9R1Q9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp6ap1Q9R1Q9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.98■□□□□ 0.47
Atp6ap1Q9R1Q9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp6ap1Q9R1Q9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp6ap1Q9R1Q9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms