Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps29Q9QZ88 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps29Q9QZ88 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps29Q9QZ88 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps29Q9QZ88 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Vps29Q9QZ88 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Vps29Q9QZ88 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps29Q9QZ88 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps29Q9QZ88 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps29Q9QZ88 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps29Q9QZ88 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps29Q9QZ88 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms