Protein–RNA interactions for Protein: Q9JKJ9

Cyp39a1, 24-hydroxycholesterol 7-alpha-hydroxylase, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyp39a1Q9JKJ9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cyp39a1Q9JKJ9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cyp39a1Q9JKJ9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cyp39a1Q9JKJ9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cyp39a1Q9JKJ9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cyp39a1Q9JKJ9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cyp39a1Q9JKJ9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cyp39a1Q9JKJ9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm7290-201ENSMUST00000104990 617 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm12918-201ENSMUST00000120234 636 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm15710-201ENSMUST00000121821 636 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm5075-201ENSMUST00000196916 622 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cyp39a1Q9JKJ9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cyp39a1Q9JKJ9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms