Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rhox4bQ9JI43 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Gm13238-201ENSMUST00000117655 780 ntBASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.85□□□□□ -0.03
Rhox4bQ9JI43 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhox4bQ9JI43 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rhox4bQ9JI43 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rhox4bQ9JI43 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rhox4bQ9JI43 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhox4bQ9JI43 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rhox4bQ9JI43 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.81□□□□□ -0.04
Rhox4bQ9JI43 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms