Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps35Q9EQH3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps35Q9EQH3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps35Q9EQH3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps35Q9EQH3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps35Q9EQH3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps35Q9EQH3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.33■□□□□ 0.53
Vps35Q9EQH3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Vps35Q9EQH3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps35Q9EQH3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.33■□□□□ 0.52
Vps35Q9EQH3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps35Q9EQH3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps35Q9EQH3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms