Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp2aQ9DB34 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 BC021767-201ENSMUST00000126387 1716 ntBASIC19.17■□□□□ 0.66
Chmp2aQ9DB34 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Chmp2aQ9DB34 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.15■□□□□ 0.66
Chmp2aQ9DB34 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp2aQ9DB34 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.14■□□□□ 0.66
Chmp2aQ9DB34 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms