Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3404Q9D506 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3404Q9D506 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3404Q9D506 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm7290-201ENSMUST00000104990 617 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm12933-201ENSMUST00000120203 872 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm12918-201ENSMUST00000120234 636 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm15710-201ENSMUST00000121821 636 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm5075-201ENSMUST00000196916 622 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Gm3404Q9D506 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.54■□□□□ 0.72
Gm3404Q9D506 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.53■□□□□ 0.72
Gm3404Q9D506 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Gm3404Q9D506 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Gm6211-202ENSMUST00000167849 925 ntBASIC19.52■□□□□ 0.72
Gm3404Q9D506 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3404Q9D506 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3404Q9D506 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3404Q9D506 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3404Q9D506 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3404Q9D506 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Gm3404Q9D506 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.51■□□□□ 0.71
Gm3404Q9D506 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.51■□□□□ 0.71
Gm3404Q9D506 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3404Q9D506 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Gm13148-201ENSMUST00000118892 745 ntBASIC19.5■□□□□ 0.71
Gm3404Q9D506 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.5■□□□□ 0.71
Gm3404Q9D506 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm3404Q9D506 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3404Q9D506 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.49■□□□□ 0.71
Gm3404Q9D506 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3404Q9D506 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Gm3404Q9D506 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms