Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf115Q9D0C1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf115Q9D0C1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf115Q9D0C1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf115Q9D0C1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf115Q9D0C1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf115Q9D0C1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Gm715-201ENSMUST00000117865 831 ntBASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rnf115Q9D0C1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf115Q9D0C1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf115Q9D0C1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms