Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.64■□□□□ 0.73
Mms19Q9D071 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Mms19Q9D071 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mms19Q9D071 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Gm5408-201ENSMUST00000197998 747 ntBASIC19.63■□□□□ 0.73
Mms19Q9D071 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Mms19Q9D071 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mms19Q9D071 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.62■□□□□ 0.73
Mms19Q9D071 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.62■□□□□ 0.73
Mms19Q9D071 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Gm27011-201ENSMUST00000182352 972 ntBASIC19.62■□□□□ 0.73
Mms19Q9D071 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.62■□□□□ 0.73
Mms19Q9D071 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mms19Q9D071 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mms19Q9D071 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mms19Q9D071 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.62■□□□□ 0.73
Mms19Q9D071 BC021767-201ENSMUST00000126387 1716 ntBASIC19.62■□□□□ 0.73
Mms19Q9D071 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Mms19Q9D071 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.61■□□□□ 0.73
Mms19Q9D071 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.61■□□□□ 0.73
Mms19Q9D071 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.61■□□□□ 0.73
Mms19Q9D071 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.61■□□□□ 0.73
Mms19Q9D071 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mms19Q9D071 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mms19Q9D071 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mms19Q9D071 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Mms19Q9D071 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mms19Q9D071 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Gm26524-201ENSMUST00000192339 390 ntBASIC19.59■□□□□ 0.73
Mms19Q9D071 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mms19Q9D071 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Mms19Q9D071 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms