Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CYI0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CYI0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CYI0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Q9CYI0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.32■□□□□ 0.84
Q9CYI0 Gm44549-201ENSMUST00000208351 577 ntBASIC20.32■□□□□ 0.84
Q9CYI0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.32■□□□□ 0.84
Q9CYI0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CYI0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.31■□□□□ 0.84
Q9CYI0 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.31■□□□□ 0.84
Q9CYI0 Dio3-201ENSMUST00000097228 1449 ntBASIC20.31■□□□□ 0.84
Q9CYI0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.31■□□□□ 0.84
Q9CYI0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.31■□□□□ 0.84
Q9CYI0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CYI0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
Q9CYI0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.3■□□□□ 0.84
Q9CYI0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.3■□□□□ 0.84
Q9CYI0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Q9CYI0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.3■□□□□ 0.84
Q9CYI0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.3■□□□□ 0.84
Q9CYI0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.3■□□□□ 0.84
Q9CYI0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.3■□□□□ 0.84
Q9CYI0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CYI0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Q9CYI0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.29■□□□□ 0.84
Q9CYI0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CYI0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Q9CYI0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Q9CYI0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Q9CYI0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.28■□□□□ 0.84
Q9CYI0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.28■□□□□ 0.84
Q9CYI0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Q9CYI0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.28■□□□□ 0.84
Q9CYI0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Q9CYI0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CYI0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CYI0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CYI0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CYI0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.27■□□□□ 0.84
Q9CYI0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Q9CYI0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Q9CYI0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q9CYI0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Q9CYI0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.26■□□□□ 0.83
Q9CYI0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Q9CYI0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CYI0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Q9CYI0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms