Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Haglr-201ENSMUST00000100000 2085 ntBASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssr1Q9CY50 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssr1Q9CY50 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Ssr1Q9CY50 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssr1Q9CY50 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.84■□□□□ 0.77
Ssr1Q9CY50 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Gm43060-201ENSMUST00000200621 289 ntBASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssr1Q9CY50 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.83■□□□□ 0.76
Ssr1Q9CY50 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms