Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Gm6365-201ENSMUST00000054711 744 ntBASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc96Q9CR92 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Gm13534-201ENSMUST00000121169 513 ntBASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Nespas-201ENSMUST00000143738 1083 ntBASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc96Q9CR92 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc96Q9CR92 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc96Q9CR92 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc96Q9CR92 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc96Q9CR92 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc96Q9CR92 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc96Q9CR92 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Gm38205-201ENSMUST00000192243 258 ntBASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc96Q9CR92 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc96Q9CR92 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc96Q9CR92 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc96Q9CR92 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms