Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa3Q9CQ71 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa3Q9CQ71 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Gm37179-201ENSMUST00000194862 823 ntBASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa3Q9CQ71 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpa3Q9CQ71 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
Rpa3Q9CQ71 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rpa3Q9CQ71 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpa3Q9CQ71 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa3Q9CQ71 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa3Q9CQ71 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa3Q9CQ71 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa3Q9CQ71 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms