Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska1Q9CPV1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska1Q9CPV1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Gm27801-201ENSMUST00000184174 223 ntBASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Gm6139-201ENSMUST00000079261 882 ntBASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ska1Q9CPV1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.29■□□□□ 0.36
Ska1Q9CPV1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska1Q9CPV1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Gm45417-201ENSMUST00000209533 758 ntBASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska1Q9CPV1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Gm26833-201ENSMUST00000180899 440 ntBASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.27■□□□□ 0.36
Ska1Q9CPV1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Ska1Q9CPV1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ska1Q9CPV1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ska1Q9CPV1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska1Q9CPV1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms