Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tlr3Q99MB1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tlr3Q99MB1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tlr3Q99MB1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tlr3Q99MB1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tlr3Q99MB1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tlr3Q99MB1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms