Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb3Q91XZ7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Gm43173-201ENSMUST00000202246 593 ntBASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb3Q91XZ7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb3Q91XZ7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb3Q91XZ7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb3Q91XZ7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb3Q91XZ7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb3Q91XZ7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb3Q91XZ7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb3Q91XZ7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms