Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TraipQ8VIG6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TraipQ8VIG6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TraipQ8VIG6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TraipQ8VIG6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.58■□□□□ 0.72
TraipQ8VIG6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TraipQ8VIG6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TraipQ8VIG6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TraipQ8VIG6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TraipQ8VIG6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TraipQ8VIG6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.58■□□□□ 0.72
TraipQ8VIG6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TraipQ8VIG6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TraipQ8VIG6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.56■□□□□ 0.72
TraipQ8VIG6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.56■□□□□ 0.72
TraipQ8VIG6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TraipQ8VIG6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.55■□□□□ 0.72
TraipQ8VIG6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.55■□□□□ 0.72
TraipQ8VIG6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TraipQ8VIG6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.54■□□□□ 0.72
TraipQ8VIG6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TraipQ8VIG6 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
TraipQ8VIG6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.53■□□□□ 0.72
TraipQ8VIG6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Mir6349-201ENSMUST00000184059 97 ntBASIC19.53■□□□□ 0.72
TraipQ8VIG6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TraipQ8VIG6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.52■□□□□ 0.72
TraipQ8VIG6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Gm15375-201ENSMUST00000119510 849 ntBASIC19.52■□□□□ 0.72
TraipQ8VIG6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TraipQ8VIG6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
TraipQ8VIG6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms