Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Gm13168-201ENSMUST00000121771 632 ntBASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ndc1Q8VCB1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ndc1Q8VCB1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ndc1Q8VCB1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ndc1Q8VCB1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ndc1Q8VCB1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms