Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf8Q8VC56 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf8Q8VC56 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf8Q8VC56 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf8Q8VC56 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Gm42778-201ENSMUST00000199644 553 ntBASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf8Q8VC56 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf8Q8VC56 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf8Q8VC56 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf8Q8VC56 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms