Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC26.27■■□□□ 1.8
Cd109Q8R422 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC26.27■■□□□ 1.8
Cd109Q8R422 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cd109Q8R422 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cd109Q8R422 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cd109Q8R422 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cd109Q8R422 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.27■■□□□ 1.8
Cd109Q8R422 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cd109Q8R422 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC26.26■■□□□ 1.79
Cd109Q8R422 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cd109Q8R422 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cd109Q8R422 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cd109Q8R422 Gm43799-201ENSMUST00000201845 579 ntBASIC26.25■■□□□ 1.79
Cd109Q8R422 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cd109Q8R422 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cd109Q8R422 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cd109Q8R422 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Cd109Q8R422 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cd109Q8R422 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cd109Q8R422 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC26.23■■□□□ 1.79
Cd109Q8R422 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Cd109Q8R422 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cd109Q8R422 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cd109Q8R422 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Cd109Q8R422 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Cd109Q8R422 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cd109Q8R422 Arhgef4-208ENSMUST00000211073 171 ntBASIC26.22■■□□□ 1.79
Cd109Q8R422 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cd109Q8R422 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Cd109Q8R422 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Cd109Q8R422 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC26.22■■□□□ 1.79
Cd109Q8R422 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cd109Q8R422 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cd109Q8R422 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cd109Q8R422 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cd109Q8R422 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Cd109Q8R422 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cd109Q8R422 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
Cd109Q8R422 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cd109Q8R422 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cd109Q8R422 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cd109Q8R422 Mir6349-201ENSMUST00000184059 97 ntBASIC26.21■■□□□ 1.79
Cd109Q8R422 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC26.21■■□□□ 1.79
Cd109Q8R422 Gm9987-201ENSMUST00000069768 567 ntBASIC26.21■■□□□ 1.79
Cd109Q8R422 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Cd109Q8R422 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC26.2■■□□□ 1.78
Cd109Q8R422 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cd109Q8R422 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 AC124581.1-201ENSMUST00000225416 1399 ntBASIC26.19■■□□□ 1.78
Cd109Q8R422 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Cd109Q8R422 Gm12382-201ENSMUST00000122005 922 ntBASIC26.19■■□□□ 1.78
Cd109Q8R422 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Cd109Q8R422 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cd109Q8R422 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC26.18■■□□□ 1.78
Cd109Q8R422 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.18■■□□□ 1.78
Cd109Q8R422 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Cd109Q8R422 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Cd109Q8R422 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC26.18■■□□□ 1.78
Cd109Q8R422 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cd109Q8R422 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Mir2861-201ENSMUST00000175539 82 ntBASIC26.17■■□□□ 1.78
Cd109Q8R422 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cd109Q8R422 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cd109Q8R422 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cd109Q8R422 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cd109Q8R422 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms