Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ubqln1Q8R317 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Nespas-201ENSMUST00000143738 1083 ntBASIC17.4■□□□□ 0.38
Ubqln1Q8R317 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubqln1Q8R317 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ubqln1Q8R317 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ubqln1Q8R317 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ubqln1Q8R317 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.39■□□□□ 0.38
Ubqln1Q8R317 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubqln1Q8R317 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Gm7291-201ENSMUST00000199147 382 ntBASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubqln1Q8R317 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ubqln1Q8R317 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms