Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Gm37292-201ENSMUST00000192062 758 ntBASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vopp1Q8R1C3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Gm42545-201ENSMUST00000202755 922 ntBASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vopp1Q8R1C3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.67■□□□□ 0.74
Vopp1Q8R1C3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vopp1Q8R1C3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vopp1Q8R1C3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vopp1Q8R1C3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Vopp1Q8R1C3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Gm21814-202ENSMUST00000203277 873 ntBASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vopp1Q8R1C3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vopp1Q8R1C3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.62■□□□□ 0.73
Vopp1Q8R1C3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms