Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trnt1Q8K1J6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trnt1Q8K1J6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trnt1Q8K1J6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trnt1Q8K1J6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trnt1Q8K1J6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Trnt1Q8K1J6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trnt1Q8K1J6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trnt1Q8K1J6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trnt1Q8K1J6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Gm42569-201ENSMUST00000200539 472 ntBASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trnt1Q8K1J6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trnt1Q8K1J6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms