Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rtn1Q8K0T0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn1Q8K0T0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn1Q8K0T0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rtn1Q8K0T0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn1Q8K0T0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn1Q8K0T0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn1Q8K0T0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn1Q8K0T0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn1Q8K0T0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms