Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox30Q8CGW4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Gm13534-201ENSMUST00000121169 513 ntBASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox30Q8CGW4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox30Q8CGW4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox30Q8CGW4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox30Q8CGW4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox30Q8CGW4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.14■□□□□ 0.82
Sox30Q8CGW4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sox30Q8CGW4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Sox30Q8CGW4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox30Q8CGW4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox30Q8CGW4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox30Q8CGW4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox30Q8CGW4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox30Q8CGW4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms