Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rbm28Q8CGC6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbm28Q8CGC6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Gm44549-201ENSMUST00000208351 577 ntBASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rbm28Q8CGC6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
Rbm28Q8CGC6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Gm10252-201ENSMUST00000209541 832 ntBASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rbm28Q8CGC6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rbm28Q8CGC6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Dio3-201ENSMUST00000097228 1449 ntBASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.65■■□□□ 1.06
Rbm28Q8CGC6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Rbm28Q8CGC6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rbm28Q8CGC6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rbm28Q8CGC6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Rbm28Q8CGC6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rbm28Q8CGC6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rbm28Q8CGC6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rbm28Q8CGC6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rbm28Q8CGC6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rbm28Q8CGC6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rbm28Q8CGC6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms