Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ShfQ8CG80 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
ShfQ8CG80 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.43■□□□□ 0.22
ShfQ8CG80 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ShfQ8CG80 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Gm13146-201ENSMUST00000118508 780 ntBASIC16.42■□□□□ 0.22
ShfQ8CG80 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.42■□□□□ 0.22
ShfQ8CG80 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.42■□□□□ 0.22
ShfQ8CG80 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ShfQ8CG80 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
ShfQ8CG80 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ShfQ8CG80 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.41■□□□□ 0.22
ShfQ8CG80 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ShfQ8CG80 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ShfQ8CG80 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.4■□□□□ 0.22
ShfQ8CG80 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.4■□□□□ 0.22
ShfQ8CG80 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ShfQ8CG80 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ShfQ8CG80 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ShfQ8CG80 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.39■□□□□ 0.21
ShfQ8CG80 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ShfQ8CG80 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
ShfQ8CG80 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
ShfQ8CG80 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ShfQ8CG80 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ShfQ8CG80 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ShfQ8CG80 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ShfQ8CG80 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ShfQ8CG80 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.37■□□□□ 0.21
ShfQ8CG80 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.37■□□□□ 0.21
ShfQ8CG80 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.37■□□□□ 0.21
ShfQ8CG80 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ShfQ8CG80 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.37■□□□□ 0.21
ShfQ8CG80 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms