Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3dQ8BX13 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3dQ8BX13 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Gm7860-201ENSMUST00000121190 879 ntBASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Ube3dQ8BX13 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3dQ8BX13 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3dQ8BX13 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.27■□□□□ 0.19
Ube3dQ8BX13 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3dQ8BX13 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Gm13534-201ENSMUST00000121169 513 ntBASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Mir5133-201ENSMUST00000174955 77 ntBASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube3dQ8BX13 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms