Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup54Q8BTS4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nup54Q8BTS4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup54Q8BTS4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup54Q8BTS4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup54Q8BTS4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup54Q8BTS4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup54Q8BTS4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms