Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.84■□□□□ 0.45
Cpsf4Q8BQZ5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4Q8BQZ5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4Q8BQZ5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4Q8BQZ5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4Q8BQZ5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Gm7860-201ENSMUST00000121190 879 ntBASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Gm29257-201ENSMUST00000186115 639 ntBASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4Q8BQZ5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4Q8BQZ5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Gm7514-201ENSMUST00000209475 934 ntBASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4Q8BQZ5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4Q8BQZ5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cpsf4Q8BQZ5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4Q8BQZ5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms