Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh20Q8BIZ0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh20Q8BIZ0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh20Q8BIZ0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh20Q8BIZ0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh20Q8BIZ0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh20Q8BIZ0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh20Q8BIZ0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh20Q8BIZ0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh20Q8BIZ0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh20Q8BIZ0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh20Q8BIZ0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms