Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.99■□□□□ 0.79
Depdc1bQ8BH88 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1bQ8BH88 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1bQ8BH88 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1bQ8BH88 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1bQ8BH88 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Gm27011-201ENSMUST00000182352 972 ntBASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1bQ8BH88 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Depdc1bQ8BH88 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
Depdc1bQ8BH88 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Depdc1bQ8BH88 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1bQ8BH88 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Mir5133-201ENSMUST00000174955 77 ntBASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1bQ8BH88 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms