Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc5a7Q8BGY9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc5a7Q8BGY9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc5a7Q8BGY9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc5a7Q8BGY9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.09■□□□□ 0.17
Slc5a7Q8BGY9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Slc5a7Q8BGY9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.08■□□□□ 0.17
Slc5a7Q8BGY9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc5a7Q8BGY9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Slc5a7Q8BGY9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc5a7Q8BGY9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Slc5a7Q8BGY9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms