Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Gm8493-201ENSMUST00000196881 489 ntBASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Gm6139-201ENSMUST00000079261 882 ntBASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smndc1Q8BGT7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smndc1Q8BGT7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.77■□□□□ 0.43
Smndc1Q8BGT7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smndc1Q8BGT7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Gm43017-201ENSMUST00000198296 752 ntBASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smndc1Q8BGT7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smndc1Q8BGT7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smndc1Q8BGT7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms