Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Samm50Q8BGH2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Samm50Q8BGH2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Samm50Q8BGH2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Samm50Q8BGH2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Samm50Q8BGH2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Gm7514-201ENSMUST00000209475 934 ntBASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Samm50Q8BGH2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Samm50Q8BGH2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Samm50Q8BGH2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Samm50Q8BGH2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Samm50Q8BGH2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Samm50Q8BGH2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms