Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Prpf40bQ80W14 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf40bQ80W14 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Gm15378-201ENSMUST00000121894 207 ntBASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf40bQ80W14 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Gm7860-201ENSMUST00000121190 879 ntBASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Gm10819-201ENSMUST00000099988 561 ntBASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf40bQ80W14 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf40bQ80W14 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf40bQ80W14 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
Prpf40bQ80W14 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf40bQ80W14 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf40bQ80W14 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.14■□□□□ 0.97
Prpf40bQ80W14 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Prpf40bQ80W14 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf40bQ80W14 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf40bQ80W14 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Gm10231-201ENSMUST00000181584 441 ntBASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Gm10175-202ENSMUST00000208752 441 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms