Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rif1Q6PR54 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rif1Q6PR54 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm15375-201ENSMUST00000119510 849 ntBASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm43575-201ENSMUST00000196420 516 ntBASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm43347-201ENSMUST00000200226 580 ntBASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.49■□□□□ 0.07
Rif1Q6PR54 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rif1Q6PR54 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rif1Q6PR54 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.47■□□□□ 0.07
Rif1Q6PR54 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Gm10576-201ENSMUST00000191927 825 ntBASIC15.47■□□□□ 0.07
Rif1Q6PR54 Gm17808-201ENSMUST00000200859 894 ntBASIC15.47■□□□□ 0.07
Rif1Q6PR54 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rif1Q6PR54 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.47■□□□□ 0.07
Rif1Q6PR54 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.46■□□□□ 0.07
Rif1Q6PR54 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Mir5130-201ENSMUST00000175160 84 ntBASIC15.46■□□□□ 0.07
Rif1Q6PR54 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.46■□□□□ 0.07
Rif1Q6PR54 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rif1Q6PR54 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.46■□□□□ 0.06
Rif1Q6PR54 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rif1Q6PR54 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rif1Q6PR54 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms