Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sp140Q6NSQ5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Nespas-201ENSMUST00000143738 1083 ntBASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Fst-202ENSMUST00000223640 2612 ntBASIC18.65■□□□□ 0.58
Sp140Q6NSQ5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sp140Q6NSQ5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Gm5874-201ENSMUST00000096101 508 ntBASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sp140Q6NSQ5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Gm42642-201ENSMUST00000200683 355 ntBASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sp140Q6NSQ5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sp140Q6NSQ5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Gm18671-201ENSMUST00000214826 683 ntBASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sp140Q6NSQ5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Gm7514-201ENSMUST00000209475 934 ntBASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms