Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Commd3Q63829 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Commd3Q63829 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Commd3Q63829 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Commd3Q63829 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Commd3Q63829 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.37■□□□□ 0.05
Commd3Q63829 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Commd3Q63829 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.36■□□□□ 0.05
Commd3Q63829 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Commd3Q63829 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Commd3Q63829 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Commd3Q63829 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.35■□□□□ 0.05
Commd3Q63829 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.35■□□□□ 0.05
Commd3Q63829 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.35■□□□□ 0.05
Commd3Q63829 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Commd3Q63829 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Commd3Q63829 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Commd3Q63829 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Commd3Q63829 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Commd3Q63829 Fst-202ENSMUST00000223640 2612 ntBASIC15.33■□□□□ 0.05
Commd3Q63829 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Commd3Q63829 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Commd3Q63829 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Commd3Q63829 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Commd3Q63829 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.33■□□□□ 0.04
Commd3Q63829 Gm5921-201ENSMUST00000075898 882 ntBASIC15.33■□□□□ 0.04
Commd3Q63829 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Commd3Q63829 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Commd3Q63829 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Commd3Q63829 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.32■□□□□ 0.04
Commd3Q63829 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.32■□□□□ 0.04
Commd3Q63829 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Commd3Q63829 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Commd3Q63829 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Commd3Q63829 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Commd3Q63829 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Commd3Q63829 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Commd3Q63829 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms