Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxc1Q61572 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Foxc1Q61572 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc1Q61572 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxc1Q61572 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.42□□□□□ -0.26
Foxc1Q61572 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.42□□□□□ -0.26
Foxc1Q61572 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Mir5133-201ENSMUST00000174955 77 ntBASIC13.42□□□□□ -0.26
Foxc1Q61572 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Foxc1Q61572 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc1Q61572 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.41□□□□□ -0.26
Foxc1Q61572 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxc1Q61572 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc1Q61572 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.4□□□□□ -0.26
Foxc1Q61572 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.4□□□□□ -0.26
Foxc1Q61572 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxc1Q61572 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxc1Q61572 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Foxc1Q61572 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxc1Q61572 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms